Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs1391031 chr3:139267712 A/G 4.83E-5 500 31.53 33.97 19.32 KM Plot
THCA rs139441695 chr1:41557601 GA/G 1.26E-7 501 27.33 30.48 31.9 KM Plot
THCA rs139905115 chr10:43302317 GA/GAA 2.28E-5 496 32.03 27 14.33 KM Plot
THCA rs140389871 chr7:16468426 G/GA 1.81E-5 491 31.3 32.6 32.02 KM Plot
THCA rs140423586 chr16:15178314 TAA/T 9.14E-5 494 32.88 29.5 23.23 KM Plot
THCA rs140649426 chr3:122555346 G/A 1.32E-7 499 32.03 23.7 18.38 KM Plot
THCA rs140667637 chr11:77956371 G/GA 2.36E-5 500 32.48 30.63 27.3 KM Plot
THCA rs140703960 chr1:152979114 T/C 0.000142 499 31.53 32.37 37.7 KM Plot
THCA rs140779889 chr10:104960518 TTTG/T 1.2E-13 496 31.03 35.6 32.1 KM Plot
THCA rs140875716 chr3:69181048 C/CA 4.03E-7 501 32.03 30.27 14.8 KM Plot
THCA rs140937756 chr4:1139124 G/A 1.86E-13 498 31.6 31.47 32.1 KM Plot
THCA rs141022276 chr10:7889947 GA/G 1.66E-5 499 31.47 32.65 19.1 KM Plot
THCA rs141447291 chr10:7866263 CT/C 6.98E-5 497 31.47 32.43 18.43 KM Plot
THCA rs141520237 chr10:81616336 C/G 9.58E-10 486 31.72 30.78 14.52 KM Plot
THCA rs141643071 chr13:50122086 GTTA/G 1.77E-5 500 34.52 30.37 31.77 KM Plot